Below you can find a list of exemplary theses proposals. Please click into the title to find out more. To learn more about the context of these projects, we strongly encourage you to visit the pages of the supervising faculty members and their research groups linked from here.

Note that this list is continuously updated and that you are welcome to contact our faculty members with your own proposals. 

 

Title

Hosting Group

Supervisor

Detecting the time arrow in single-cell transcriptomics data Dynamical Systems Biology Lab
Experimental and Health Science Dept.
Jordi Garcia-Ojalvo
[email protected]
Molecular basis of cellular memory Dynamical Systems Biology Lab
Experimental and Health Science Dept.
Jordi Garcia-Ojalvo
[email protected]
Fast algorithms for treatment planning in electroporation based therapies Biomedical Electronics Research Group
Information and Communication Technologies Dept.
Antoni Ivorra
[email protected]
Galvanic power transfer Biomedical Electronics Research Group
Information and Communication Technologies Dept.
Antoni Ivorra
[email protected]
Technology development of magnetic resonance imaging sequences Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Fluid simulations to estimate the risk of thrombus formation in the portal vein of cirrhotic patients Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Relationship between wall shear stress and right ventricle dysplasia Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
3D reconstruction of the left atria from multiple 2D images Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Advanced echocardiographic image processing with machine learning Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Meshless mechanical model to simulate brain development in normal and abnormal infants Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Detection of ectopic focus in the heart with machine learning on a large virtual population of electrophysiological simulations obtained from HPC based solvers Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Reinforcement learning to guide radio-frequency ablation in patients with cardiac arrhythmias Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Modelling of radio-frequency ablation in patient-specific left atria and effect on its electromechanics Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Cardiomyocyte fiber reconstruction with deep learning Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Segmentation, processing and advanced visualization of atrial data from 4D-flow MRI Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Augmented reality and mobile-based digitalization, processing,classification and visualization of electrocardiograms in a real-world clinical environment Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Segmentation and morphological analysis of the left atria from CT images with machine-learning tools Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Real-time estimation of thrombotic risk in the left atria interacting with medical devices Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Virtual and augmented reality platform for left atrial appendage occlusion device implantation Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Modelling of thrombus formation in the left atrial appendage Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Fluid simulations of blood flow in the left atrial appendage in patient specific geometries with different devices Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Development of user interface for a web platform for anatomical and electrophysiological cardiac data processing and visualization Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Computational models of brain development in infants with Intra-Uterine Growth Restriction Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Real-Time Microwave Imaging Device for Endoscopic Explorations and Interventions Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Cardiac Segmentation on DE-MRI with deep learning-based tools Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Coupling cerebral vasculature with brain tissue development Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Electrophysiological model of the left ventricle in the presence of heterogeneous scar to predict optimal ablation targets with Open-Source software Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Machine learning tools for risk prediction of thrombus formation and occluder device selection in left atrial appendages Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Federated learning on cardiac magnetic resonance imaging data Sensing in Physiology and Biomedicine
Information and Communication Technologies Dept.
Oscar Camara
[email protected]
Quantum machine learning for biomedical data analysis Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Miguel A. González Ballester
[email protected]
PET left ventricular uptake quantification performance using a 3D semiautomatic anatomic – based segmentation approach in type 2 diabetes mellitus patients Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Miguel A. González Ballester
[email protected]
Design and implementation of light DNN architecture for organ segmentation on abdominal CT scans Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Miguel A. González Ballester
[email protected]
Non-linear Analysis of EMG Signals Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Simone Tassani
[email protected]
Identification of statistical critical area of proximal femur when a lateral fall happens Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Simone Tassani
[email protected]
Modelling buckling effect for the prediction of trabecular bone failure in osteoporotic tissue Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Simone Tassani
[email protected]
Mapping intervertebral disc extracellular matrix degradation in terms of catabolic cells response using In-silico modelling Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Carlos Ruiz
[email protected]
Geometrical differences for classification of fracture and non-fracture cases of osteoporotic patients Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Carlos Ruiz
[email protected]
Intra-operative fusion of video stream for foetal surgery Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Mario Ceresa
[email protected]
Patient-specific exploration of knee-joint biomechanics in a cohort of osteoarthritis patients Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Mechanobiology and computational systems biology for the exploration of the early development atherosclerosis Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Intelligent enrichment of specialized corpora to generate of disease- and cell-specific interactomes in computational systems biology Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Biochemical changes in articular cartilage tissue and interactions with chondrocyte biophysical regulation Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Intervertebral disc systems mechanobiology Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Multiscale patient-specific modelling of articular chondrocyte biochemical regulation Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Mechanistic modelling of chondrocyte-mediated destruction of hyaline cartilage in intervertebral disc degeneration and osteoarthritis Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Body-wide modelling of immune cell circulation in the blood flow Simulation, Imaging & Modelling for Biomedical Systems
Information and Communication Technologies Dept.
Jérôme Noailly
[email protected]
Coexistence of synchronization and desynchronization: Data-driven analysis of coupled network models Nonlinear Time Series Analysis
Information and Communication Technologies Dept.
Ralph Gregor Andrzejak
[email protected]
Finding epileptic brain areas by analyzing micro-electroencephalographic recordings Nonlinear Time Series Analysis
Information and Communication Technologies Dept.
Ralph Gregor Andrzejak
[email protected]
X-PCI Cardiac remodelling in PHT Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Patricia García
[email protected]
Visualisation & analysis tools for X-PCI data Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Patricia García
[email protected]
Computational model of the fetal heart with congenital heart diseases Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Patricia García
[email protected]
Synchrotron X-PCI and SAXS/WAXS fibrosis characterisation Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Bart Bijnens
[email protected]
Modeling Chronic Thromboembolic Pulmonary Hypertension Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Bart Bijnens
[email protected]
Deep-learning-based quantification of M-Mode images Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Guillermo Jiménez
[email protected]
Relating genotypic and phenotypic factors in hypertrophic patients using machine learning Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Guillermo Jiménez
[email protected]
Comparison and validation of different implementations of ML-based analysis framework Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Mariana Antunes Nogueira
[email protected]
Optimising information fusion in Unsupervised Multiple Kernel Learning Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Mariana Antunes Nogueira
[email protected]
Improving the interpretability of a labour monitoring and decision-support user interface Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Mariana Antunes Nogueira
[email protected]
Topological Data Analysis Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Pablo-Miki Martí
[email protected]
Extension of PHATE to allow data fusion Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Pablo-Miki Martí
[email protected]
Improving efficiency: downsampling or low-rank approximation methods Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Pablo-Miki Martí
[email protected]
Comparing MKL-DR with other multiview methods Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Pablo-Miki Martí
[email protected]
MKL-DR with echocardiographic images Translational Computing in Cardiology
IDIBAPS/Hospital Clinic
Pablo-Miki Martí
[email protected]