Institution Supervisor Master Thesis Project Student
Computational Genomics
Center for Protein Research (Copenhagen) Alberto Santos Priorization of cancer driver genes using normal tissue expression Enric Mosella Sanz
CRG Roderic Guigó Cassette microexon splicing pattern in human tissues Reza Sodaei
CRG Rory Johnson Detection of long non-coding RNA driver genes across 1104 tumor genomes with ExInAtor Andrés Arturo Lanzós Camaioni
GRIB (IMIM/UPF) Mar Albà and Lucas Carey Identification of De Novo Genes in Yeast Using Comparative Transcriptomics William Blevins
GRIB (IMIM/UPF) Abel González-Pérez and Nuria Lopez-Bigas Uncovering the tumorigenic mechanisms of chromatin regulatory factors Joan Frigola Rissech
Hospital Clinic Hospital Clinic Clinical impact of clonal and subclonal TP53, SF3B1, and ATM mutations in Chronic Lymphocytic Leukemia Ferran Nadeu Prat
IBE (UPF-CSIC) Josefa González Genome-wide signatures of local adaptation in European populations of Drosophila melanogaster Lidia Mateo Ramos
IBE (UPF-CSIC) Tomàs Marques-Bonet Chimpanzee origins and geospatial genetic diversity Marc de Manuel Montero
IBE (UPF-CSIC) Tomàs Marques-Bonet An upgrade and revision on the Chimpanzee Reference Genome Lukas Kuderna
IBE (UPF-CSIC) David Comas Study of the human African genome landscape through the analysis of complete genomes Gerard Serra Vidal
IMIM Lara Nonell Classification and gene expression analysis of clinical monoclonal B cell lymphocytosis and Clinical Lymphocytic Leukemia Magdalena Arnal Segura
IMIM Juan Ramón González Effect of chromosomal inversions in regional methylaton profiles Carlos Ruiz Arenas
UB Esteban Vegas y Ferran Reverter A comprehensive evaluation of multiple kernel learning algorithms for biological sequence data Maitena Tellaetxe Abete
UPF Lucas Carey Coding sequence determines steady-state mRNA levels Júlia Domingo Espinós
Structural Bioinformatics
Barcelona Supercomputing Center Juan Fernández-Recio Expanding template-based protein-protein complex prediction by energy-based docking Luis Ángel Rodríguez Lumbreras
CRG Toni Gabaldón Structural evolution of Long Non-Coding RNAs Jesse Willis
GRIB (IMIM/UPF) Gianni de Fabritiis High-throughput molecular simulations on distributed CPUs Iñigo Sáenz Murga
GRIB (IMIM/UPF) Jordi Mestres Classification of GPCR orthosteric binding site Eric March Vila
Intelligent Pharma SL Óscar Villacañas Free binding energy model using Linear Interaction Energy Method for human Pregnane X Receptor (PXR) Víctor J. Gallardo López
Computational Systems Biology & Artificial Intelligence
UPF Jordi Gª Ojalvo Molecular mechanisms and functional outcomes of glucose-regulated transcription factor pulsing in Saccharomyces cerevisiae Rosa Martinez Corral
Web development & Bioinformatic Tools
Lead Molecular Design SL Ismael Zamora Development of an algorithm for the structure elucidation of unknown small molecule drugs Tatiana Radchenko
UB Esteban Vegas y Ferran Reverter Bio-inspired algorithms for classification applied to bioinformatics Mario Solís López