Journal articles - SIMBIOsys - Simulation, Imaging and Modelling for Biomedical Systems (UPF)


Higueras-Esteban A, Delgado-Martínez I, Serrano L, Principe A, González Ballester MA, Rocamora R, Conesa G, Serra L. A multimodal and multidisciplinary platform for epilepsy surgery. Computer Methods and Programs in Biomedicine 2021; 203( ). Publication link e-Repositori
Torrents-Barrena J, Monill N, Piella G, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. Assessment of Radiomics and Deep Learning for the Segmentation of Fetal and Maternal Anatomy in Magnetic Resonance Imaging and Ultrasound. Academic Radiology 2021; 28(2): 173-188. Publication link
Mariani N, Borsini A, Cecil CAM, Felix JF, Sebert S, Cattaneo A, Piella G et al.. Identifying causative mechanisms linking early-life stress to psycho-cardio-metabolic multi-morbidity: the earlycause projec. PLoS ONE 2021; 16(1): 1-18. Publication link e-Repositori
Baumgartner L, Wuertz-Kozak K, Le Maitre CL, Wignall F, Richardson SM, Hoyland J, Ruiz Wills C, González Ballester MA, Neidlin M, Alexopoulos LG, Noailly J. Multiscale Regulation of the Intervertebral Disc: Achievements in Experimental, In Silico, and Regenerative Research. International Journal of Molecular Sciences 2021; 22(2): 1-45. Publication link e-Repositori
Martí-Juan G, Sanroma-Guell G, Cacciaglia R, Falcon C, Operto G, Molinuevo JL, González Ballester MA, Domingo Gispert J, Piella G. Nonlinear interaction between APOE-e4 allele load and age in the hippocampal surface of cognitively intact individuals. Human Brain Mapping 2021; 42(1): 47-64. Publication link e-Repositori
Delgado-Martínez I, Serrano L, Higueras-Esteban A, Vivas E, Rocamora R, González Ballester MA, Serra L, Conesa G. On the use of digital subtraction angiography in SEEG surgical planning to prevent collisions with vessels. World Neurosurgery 2021; ( ): 47-56. Publication link
Rafael-Palou X, Aubanell A, Bonavita I, Ceresa M, Piella G, Ribas V, González Ballester MA. Re-Identification and growth detection of pulmonary nodules without image registration using 3D siamese neural networks.. Medical Image Analysis 2021; 67( ): 1-17. Publication link e-Repositori
Hodzic A, Bernardino G, Legallois D, Gendron P, Langet H, De Craene M, González Ballester MA, Milliez P, Normand H, Bijnens B, Saloux E, Tournoux F. Right ventricular global and regional remodeling in American-style football athletes: a longitudinal 3D echocardiographic study. Applied Sciences 2021; 11(8). Publication link e-Repositori
Bernardino G, Hodzic A, Langet H, Legallois D, De Craene M, González Ballester MÁ, Saloux É, Bijnens B. Volumetric parcellation of the cardiac right ventricle for regional geometric and functional assessment. Medical Image Analysis 2021; (71). Publication link e-Repositori
Rafael-Palou X, Aubanell A, Bonavita I, Ceresa M, Piella G, Ribas V, González Ballester MA. 3D siamese neural networks for matching pulmonary nodules in series of CT scans. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Benkarim O.M., Piella G., Rekik I., Hahner N., Eixarch E., Shen D., Li G., González Ballester M.A., Sanroma G. A novel approach to multiple anatomical shape analysis: Application to fetal ventriculomegaly. Medical Image Analysis 2020; 65(101750): 1-14. Publication link
Marti-Juan G, Sanroma G, Piella G. A survey on machine and statistical learning for longitudinal analysis of neuroimaging data in Alzheimer's Disease. Computer Methods and Programs in Biomedicine 2020; 189( ). Publication link e-Repositori
Nogueira M, De Craene M, Sanchez-Martinez S, Chowdhury D, Bijnens B, Piella G. Analysis of Nonstandardized Stress Echocardiography Sequences Using Multiview Dimensionality Reduction. Medical Image Analysis 2020; 60( ). Publication link e-Repositori
Mantzagriotis S, Mangado N, González Ballester MA, Ceresa M. Analysis of pitch distortion in continuous time for cochlear implantation surgery. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Torrents-Barrena J, Monill N, Piella G, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. Assessment of radiomics and deep learning for the segmentation of fetal and maternal anatomy in magnetic resonance imaging and ultrasound. Academic Radiology 2020; 28(2). Publication link
López Picazo M, Humbert L, Winzenrieth R, Di Gregorio S, González Ballester MA, del Río Barquero LM. Association between osteoporotic femoral neck fractures and DXA-derived 3D measurements at lumbar spine: A case-control study. Archives of Osteoporosis 2020; 15(8): 1-10. Publication link
Campello VM, Martín-Isla C, Izquierdo C, Petersen SE, González Ballester MA, Lekadir K. Combining multi-sequence and synthetic images for improved segmentation of late gadolinium enhanced MRI. Lecture Notes in Computer Science / Artificial Intelligence 2020; 12009( ): 290-299.
Torrents-Barrena J, Piella G, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. Deep Q-CapsNet reinforcement learning framework for intrauterine cavity segmentation in TTTS fetal surgery planning. IEEE Transactions on Medical Imaging 2020; 20(21): 12895-12902. Publication link
Higueras Esteban A, Delgado-Martínez I, Serrano L, Principe A, González Ballester MA, Rocamora R, Serra L, Conesa G. Diffusion Tensor Imaging (DTI) tractography filtering tools for Stereotactic Electro-Encephalography (SEEG). International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Humbert L, Bagué A, Di Gregorio S, Winzenrieth R, Sevillano X, González Ballester MA, Del Rio L.. DXA-Based 3D Analysis of the Cortical and Trabecular Bone of Hip Fracture Postmenopausal Women: A Case-Control Study.. Journal of Clinical Densitometry 2020; 23(3): 403-410. Publication link
Perera-Bel E, Yagüe C, Mercadal B, Ceresa M, Beitel-White N, Davalos RV, González Ballester MA, Ivorra A. EView: an electric field visualization web platform for electroporation-based therapies. Computer Methods and Programs in Biomedicine 2020; 197(105682): 1-10. Publication link e-Repositori
Bernardino G, Benkarim Q, Sanz de la Garza M, Prat-Gonzàlez S, Sepulveda-Martinez A, Crispi F, Sitges M, Butakoff C, De Craene M, Bijnens B, González Ballester MA. Handling confounding variables in statistical shape analysis - application to cardiac remodelling. Medical Image Analysis 2020; 65(101792): 1-13. Publication link e-Repositori
Jiménez-Sánchez A, Mateus D, Kirchhoff S, Kirchhoff C, Biberthaler P, Navab N, González Ballester MA, Piella G. Hierarchical deep curriculum learning for the classification of proximal femur fractures. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Torrents-Barrena J, López-Velazco R, Eixarch E, Valenzuela-Alcaraz B, Piella G, Gratacós E, Ceresa M, González Ballester MA. Image guidance for fetoscopic laser photocoagulation in twin-to-twin transfusion syndrome fetal surgery. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Piris C, Gartner L, González Ballester MA, Noailly J, Stöcker F, Schönfelder M, Adams T, Tassani S. In-ear accelerometer-based sensor for gait classification. IEEE Sensors Journal 2020; 20(21): 12895-12902. Publication link
Loncaric F, Camara O, Piella G, Bijnens B. Integration of artificial intelligence into clinical patient management: focus on cardiac imaging.. Revista española de cardiología 2020; 74(1): 72-80. Publication link e-Repositori
Rafael-Palou X, Bonavita I, Ceresa M, Piella G, Ribas V, González Ballester MA. Integration of Convolutional Neural Networks for Pulmonary Nodule Malignancy Assessment in a Lung Cancer Classification Pipeline. Computer Methods and Programs in Biomedicine 2020; 185( ): 1-9. Publication link
Monfort E, Comte V, Lalande B, Eixarch E, González Ballester MA, Ceresa M. Multimodal registration of US and MRI scans for vascular fetal surgeries. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Cetin I, Raisi-Estabragh Z, Petersen SE, Napel S, Piechnik SK, Neubauer S, Gonzalez Ballester MA, Camara O, Lekadir K. Radiomics Signatures of Cardiovascular Risk Factors in Cardiac MRI: Results From the UK Biobank. Frontiers in cardiovascular medicine 2020; 7(591368). Publication link
Ruiz Wills C, Tassani S, di Gregorio S, Martínez S, González Ballester MA, Humbert L, Noailly J, del Río LM. Relative fragility of osteoportic femurs assessed with DXA and simulation of finite element falls guided by emergency X-rays. Revista de Osteoporosis y Metabolismo Mineral 2020; 12(2): 62-70. Publication link e-Repositori
Vujovic M, Hernández-Leo D, Tassani S, Spikol D. Round or rectangular tables for collaborative problem solving? A multimodal learning analytics study.. The British Journal of Educational Psychology 2020; 51(5): 1597-1614. Publication link e-Repositori
Perera-Bel E, Ceresa M, Torrents-Barrena J, Masoller N, Valenzuela-Alcaraz B, Gratacós E, Eixarch E, González Ballester MA. Segmentation of the placenta and its vascular tree in Doppler ultrasound for fetal surgery planning. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1): 1869-1879. Publication link e-Repositori
Baumgartner L, Reagh JJ, González Ballester MA, Noailly J. Simulating intervertebral disc cell behaviour within 3D multifactorial environments. Bioinformatics 2020; ( ). Publication link
Puigbò JY, Arsiwalla X, González Ballester MA, Verschure PFMJ. Switching operation modes in the neocortex via cholinergic neuromodulation: a computational model of uncertainty, learning and inhibition. Molecular Neurobiology 2020; 57( ): 139-149. Publication link
Bernardino G, Sanz de la Garza M, Domenech-Ximenos B, Prat-Gonzalez S, Perea RJ, Blanco I, Burgos F, Sepulveda-Martinez A, Rodriguez-Lopez M, Crispi F, Butakoff C, González Ballester MA, De Craene M, Sitges M, Bijnens B. Three-dimensional regional bi-ventricular shape remodeling is associated with exercise capacity in endurance athletes. European Journal of Applied Physiology 2020; ( ). Publication link e-Repositori
Torrents-Barrena J, Piella G, Valenzuela-Alcaraz B, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. TTS-STgan: Stacked generative adversarial networks for TTTS fetal surgery planning based on 3D ultrasound. IEEE Transactions on Medical Imaging 2020; 39(11): 3595-3606. Publication link
Altaba M, Sanchez Fibla M, Torrents-Barrena J, Eixarch E, Gratacós E, González Ballester MA, Ceresa M. Virtual reality exploration for fetal surgery. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
Gomez S, Sanchez Fibla M, Higueras Esteban A, Serra L, González Ballester MA, Ceresa M. Virtual reality exploration of SEEG placement for drug-resistant epilepsy planning. International Journal of Computer Assisted Radiology and Surgery 2020; 15(Suppl. 1).
López Picazo M, Humbert L, Di Gregorio S, González Ballester MA, del Río Barquero LM. ¿Pueden las mediciónes 3D derivadas de la DXA lumbar predecir fracturas en las vértebras dorsales?. Revista de Osteoporosis y Metabolismo Mineral 2020; 12(2): 45-52. Publication link e-Repositori
Ruiz Wills C, Olivares AL, Tassani S, Ceresa M, Zimmer V, González Ballester MA, Del Río LM, Humbert L, Noailly J.. 3D patient-specific finite element models of the proximal femur based on DXA towards the classification of fracture and non-fracture cases. Bone 2019; 121( ): 89-99. Publication link
Perera-Bel E, Ivorra A, González Ballester MA.. A plaform for irreversible electroporation treatment planning.. International Journal of Computer Assisted Radiology and Surgery 2019; 14(Suppl. 1): 13-14.
López-Linares K, Stephens M, García I, Macía I, González Ballester MA., San José Estepar R. Abdominal aortic aneurysm segmentation using convolutional neural networks trained with images generated with a synthetic shape model. Lecture Notes in Computer Science / Artificial Intelligence 2019; 11794( ): 167-174. Publication link
López Picazo M, Humbert L, di Gregorio S, González Ballester MA, del Río Barquero L. Association between osteoporosis-related vertebral fractures and DXA-derived 3D measurements at lumbar spine Journal of Bone and Mineral Research 2019; 34(1).
Rampun A, López-Linares K, Morrow PJ, Scotney BW, Wang H, Garcia Ocaña I, Maclair G, Zwiggelaar R, González Ballester MA, Macía I. Breast pectoral muscle segmentation in mammograms using a modified holistically-nested edge detection network. Medical Image Analysis 2019; 57( ): 1-17. Publication link
Masias M, Cetim I, Petersen SE, González Ballester MA, Piella G, Lekadir K.. Can one predict brain disease based on cardiac imaging data? A proof-of-concept study. International Journal of Computer Assisted Radiology and Surgery 2019; 14(Supl. 1): 4-5.
Torrents-Barrena J, López-Velazco R, Gratacós E, Eixarch E, Ceresa M, González Ballester MA.. Capsule networks for mother's womb segmentation in TTTS fetal surgery planning.. International Journal of Computer Assisted Radiology and Surgery 2019; 14(Suppl. 1): 30-31.
Cerrolaza JJ, Lopez-Picazo M, Humbert L, Sato Y, Rueckert D, González Ballester MA, Linguraru MG. Computational anatomy for multi-organ analysis in medical imaging: a review. Medical Image Analysis 2019; 56( ): 44-67. Publication link
Guardiola M, Djafri K, Challal M, González Ballester MA, Fernández-Esparrach G, Camara O, Romeu J.. Design and evaluation of an antenna applicator for a microwave colonoscopy system. IEEE transactions on antennas and propagation 2019; 67(8): 4968-4977. Publication link
Hahner N, Benkarim O, Perez-Cruz M, Piella G, Sanroma G, González Ballester MA, Gratacos E, Eixarch E. Differential regional distribution of ventricular volumes in fetuses with isolated non-severe ventriculomegaly is associated with poor neurodevelopmental outcome. Ultrasound in Obstetrics and Gynecology 2019; 54(S1). Publication link
López Picazo M, Humbert L, Di Gregorio S, González Ballester MA, Del Río Barquero LM.. Discrimination of osteoporosis-related vertebral fractures by DXA-derived 3D measurements: a retrospective case-control study.. Osteoporosis International 2019; 30(5): 1099-1110. Publication link
Xia J, Wang F, Benkarim O, Sanroma G, Piella G, González-Ballester MA, Hahner N, Eixarch E, Zhang C, Shen D, Shen D, Li G.. Fetal cortical surface atlas parcellation based on growth patterns. Human Brain Mapping 2019; 40(13): 3881-3899. Publication link
Torrents-Barrena J, Piella G, Masoller N, Gratacós E, Eixarch E, Ceresa M, González Ballester MÁ.. Fully Automatic 3D Reconstruction of the Placenta and its peripheral Vasculature in Intrauterine Fetal MRI. Medical Image Analysis 2019; 54( ): 263-279. Publication link e-Repositori
Hahner N, Benkarim O, Aertsen M, Perez-Cruz M, Piella G, Sanroma G, Bargallo N, Deprest J, González Ballester MA, Gratacos E, Eixarch E. Global and regional changes in cortical development assessed by MR in fetuses with isolated non-severe ventriculomegaly correlate with neonatal neurobehaviour. AJNR American journal of neuroradiology official journal American Society of Neuroradiology 2019; 40(9): 1567-1574. Publication link
Cetin I, Petersen SE, Camara O, González Ballester MA, Lekadir K.. Identifying alterations in the cardiac ventricles in atrial fibrillation: a radiomics approach. International Journal of Computer Assisted Radiology and Surgery 2019; 14(Suppl. 1): 75-76.
López-Linares K; García I; García A; Cortes C; Piella G; Macía I; Noailly J; González Ballester MA. Image-Based 3D Characterization of Abdominal Aortic Aneurysm Deformation After Endovascular Aneurysm Repair. Frontiers in bioengineering and biotechnology 2019; 7(267): 1-17. Publication link e-Repositori
Bonavita I, Rafael X, Ceresa M, Piella G, Ribas V, González Ballester MA.. Improving lung cancer prediction with a deep learning nodule malignancy classifier. International Journal of Computer Assisted Radiology and Surgery 2019; 14(Suppl. 1): 70-71.
Gomez-Gavara C, Moya M, Salcedo M, Piella G, Vazquez J, Martin R, Pares B, Pando E, Molino JA, Dopazo C, Dalmau M, Hidalgo E, Caralt M, Bilbao I, Charco R. Livercolor: An algorithm quantification of liver graft steatosis using machine learning and color image processing. Transplant International 2019; 32( ): 419-420.
Cikes M, Sanchez-Martinez S, Claggett B Duchateau N, Piella Fenoy G, Butakoff C, Pouleur AC, Knappe D, Biering-Sørensen T, Kutyifa V, Moss A, Stein K, Solomon SD, Bijnens B. Machine-learning based phenogrouping in heart failure to identify responders to resynchronization therapy. European Journal of Heart Failure 2019; 21(1): 74-85. Publication link e-Repositori
Jiménez A, Mateus D, Kirchhoff S, Kirchhoff S, Biberthaler P, Navab N, González Ballester MA, Piella G. Medical-based Deep Curriculum Learning for Improved Fracture Classification. Lecture Notes in Computer Science / Artificial Intelligence 2019; 11769( ): 694-702.
Zimmer VA, González Ballester MA, Piella G.. Multimodal image registration using Laplacian commutators. Information Fusion 2019; 49( ): 130-145. Publication link e-Repositori
Tassani S, Font-Llagunes JM, González Ballester MA, Noailly J.. Muscular tension significantly affects stability in standing posture.. Gait and Posture 2019; 68( ): 220-226. Publication link
Tio L, Castro F, Tassani S, Martínez S, Torres R, Arredondo R, González Ballester MA, Monllau JC, Noailly J, Monfort J. Pain catastrophizing score and gait, together with WOMAC, are altered in knee osteoarthritic patients undergoing arthroplasty surgery compared with patients following conservative treatment. Preliminary results from HOLOA project. Annals of the Rheumatic Diseases 2019; 78(Suppl. 2): 1877-1878.
Benkarim OM, Piella G, Hahner N, Eixarch E, González Ballester MA, Sanroma G.. Patch spaces and fusion strategies in patch-based label fusion.. Computerized Medical Imaging and Graphics 2019; 71( ): 79-89. Publication link
Martí-Juan G, Sanroma G, Piella G.. Revealing heterogeneity of brain imaging phenotypes in Alzheimer's disease based on unsupervised clustering of blood marker profiles.. PLoS ONE 2019; 14(3). Publication link e-Repositori
Torrents-Barrena J, Piella G, Masoller N, Gratacós E, Eixarch E, Ceresa M, Ballester MA.. Segmentation and classification in MRI and US fetal imaging: Recent trends and future prospects.. Medical Image Analysis 2019; 51( ): 61-88. Publication link
Torrents-Barrena J, López-Velazco R, Piella G, Masoller N, Valenzuela-Alcaraz B, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. TTTS-GPS: Patient specific preoperative planning and simulation platform for twin-to-twin transfusion syndrome fetal surgery. Computer Methods and Programs in Biomedicine 2019; 179(104993): 1-23. Publication link
Higueras A, Delgado-Martínez I, Serrano L, Conesa G, González Ballester MA, Serra L. Volume rendering depth mapping for fast vessel identification during intracranial deep electrode planning. International Journal of Computer Assisted Radiology and Surgery 2019; 14(Suppl. 1): 150-151.
López Picazo M, Magallón Baro A, del Río Barquero LM, di Gregorio S, Martelli Y, Romera J, Steghöfer M, González Ballester MA, Humbert L.. 3-D Subject-Specific Shape and Density Estimation of the Lumbar Spine From a Single Anteroposterior DXA Image Including Assessment of Cortical and Trabecular Bone.. IEEE Transactions on Medical Imaging 2018; 37(12): 2651-2662. Publication link
Korfiatis VC, Tassani S, Matsopoulos GK. A new Ensemble Classification System for fracture zone prediction using imbalanced micro-CT bone morphometrical data. IEEE journal of biomedical and health informatics 2018; 22(4): 1189-1196. Publication link
Carrera I, Gelber PE, Chary G, Gómez Masdeu M, González Ballester MA, Monllau, JC, Noailly J.. An intact fibula may contribute to allow early weight-bearing in surgically treated tibial plateau fractures. A computational evaluation. Knee Surgery, Sports Traumatology, Arthroscopy 2018; 26(3): 756-761. Publication link
Higueras-Esteban A, Ojeda J, Delgado-Martínez I, Pérez Enríquez C, Serrano L, Principe A, González Ballester MA, Rocamora R, Serra L, Conesa G.. Automatic segmentation of deep brain electrodes used in stereotactic electroencephalography. International Journal of Computer Assisted Radiology and Surgery 2018; 13( ). Publication link
García Ocaña M, López-Linares Román K, Maclair G, Azpíroz Puente M, Romero Martin JA, Belloch Ugarte V, Santabárbara JM, González Ballester MA, Macía I.. Breast tissue segmentation and density quantification from MRI using convolutional neural networks. International Journal of Computer Assisted Radiology and Surgery 2018; 13(s1).
López Picazo M, Humbert L, di Gregorio S, González Ballester MA, del Río L.. Can 3D-DXA derived measurements at the lumbar vertebrae predict fractures of the dorsal vertebrae?. Journal of Bone and Mineral Research 2018; 33(Suppl. 1): 163-164.
Puigbò JY, Maffei G, Herreros I, Ceresa M, González Ballester MA, Verschure PFMJ.. Cholinergic behavior-state dependent mechanisms of neocortical gain control: a neurocomputational study. Molecular Neurobiology 2018; 55(1): 249-257. Publication link
Van Rijsbergen M, Van Rietbergen B, Barthelemy V, Eltes P, Lazáry A, Lacroix D, Noailly J, Tho M, Wilson W, Ito K. Comparison of patient-specific computational models vs. clinical follow-up, for adjacent segment disc degeneration and bone remodelling after spinal fusion. PLoS ONE 2018; 13(8): 1-24. Publication link e-Repositori
Mangado N, Pons-Prats J, Coma M, Mistrik P, Piella G, Ceresa M, González Ballester MA.. Computational evaluation of Cochlear implant surgery outcomes accounting for uncertainty and parameter variability. Frontiers in Physiology 2018; 9(498): 1-14. Publication link e-Repositori
Benkarim OM, Hahner N, Piella G, Gratacos E, González Ballester MA, Eixarch E, Sanroma G.. Cortical folding alterations in fetuses with isolated non-severe ventriculomegaly. NeuroImage: Clinical 2018; 18( ): 103-114. Publication link e-Repositori
Ceresa ML, Olivares A, Noailly J, González Ballester MA.. Coupled Immunological and Biomechanical Model of Emphysema Progression. Frontiers in Physiology 2018; 9(388): 1-16. Publication link e-Repositori
Bernard O, Lalande A, Zotti C, Cervenansky F, Yang X, Heng P, Cetin I, Lekadir K, Camara O, Ballester M, Sanroma G, Napel S, Petersen S, Tziritas G, Grinias E, Khened M, Kollerathu V, Krishnamurthi G, Rohe M, Pennec X, Sermesant M, Isensee F, Jager P, Maier-Hein K.. Deep Learning Techniques for Automatic MRI Cardiac Multistructures Segmentation and Diagnosis: Is the Problem Solved?. IEEE Transactions on Medical Imaging 2018; 37(11): 2514-2525. Publication link
Guardiola M, Buitrago S, Fernández-Esparrach G, O'Callaghan JM, Romeu J, Cuatrecasas M, Córdova H, González Ballester MA, Camara O.. Dielectric properties of colon polyps, cancer and normal mucosa: ex vivo measurements from 0.5 to 20 GHz.. Medical physics 2018; 45(8): 3768-3782. Publication link
Xia J, Zhang C, Wang F, Benkarim OM, Sanroma G, Piella G, Gonzalez-Ballester MA, Hahner N, Eixarch E, Shen D, Li G.. Fetal cortical parcellation based on growth patterns. Proceedings of the IEEE International Symposium on Biomedical Imaging 2018; ( ). Publication link
Torrents-Barrena J, Piella G, Masoller N, Gratacos E, Eixarch E, Ceresa M, Ballester MAG.. Fetal MRI Synthesis via Balanced Auto-Encoder Based Generative Adversarial Networks.. Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society 2018; ( ): 2599-2602. Publication link
López-Linares K, Aranjuelo N, Kabongo L, Maclair G, Lete N, Ceresa M, García-Familiar A, Macía I, González Ballester MA.. Fully automatic detection and segmentation of abdominal aortic thrombus in post-operative CTA images using deep convolutional neural networks. Medical Image Analysis 2018; 46( ): 202-214. Publication link
Puch S, Sánchez I, Hernández A, Piella G, Prckovska V. Global Planar Convolutions for Improved Context Aggregation in Brain Tumor Segmentation. Lecture Notes in Computer Science / Artificial Intelligence 2018; ( ): 393-405. Publication link
Guardiola M., Romeu J., Fernandez-Esparrach G., González Ballester M.A., Camara O. In silico and ex vivo validation of a microwave endoscopic system for colon examinations. International Journal of Computer Assisted Radiology and Surgery 2018; 13( ).
Sanroma G, Benkarim OM, Piella G, Camara O, Wu G., Shen D, Gispert JD, Molinuevo JL, González Ballester MA.. Learning non-linear patch embeddings with neural networks for label fusion. Medical Image Analysis 2018; 44( ): 143-155. Publication link e-Repositori
Sanroma G, Benkarim OM, Piella G, Lekadir K, Hahner N, Eixarch E, González Ballester, MA.. Learning to combine complementary segmentation methods for fetal and 6-month infant brain MRI segmentation. Computerized Medical Imaging and Graphics 2018; 69( ): 52-59. Publication link e-Repositori
Torrents-Barrena J, Piella G, Masoller N, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. LSTM fully convolutional neural networks for TTTS umbilical cord segmentation. International Journal of Computer Assisted Radiology and Surgery 2018; 13( ).
Sanchez Martinez, Sergio; Duchateau, Nicolas; Erdei, Tamas; Kunszt, Gabor; Aakhus, Svend; Degiovanni, Anna; Marino, Paolo; Carluccio, Erberto; Piella Fenoy, Gemma; Fraser, Alan G.; Bijnens, Bart. Machine Learning Analysis of Left Ventricular Function to Characterize Heart Failure with Preserved Ejection Fraction. Circulation. Cardiovascular imaging 2018; 11(4). Publication link e-Repositori
Ruiz C, Del Rio L, Tassani S, Gonzalez MA, Humbert L, Noailly J, Di Gregorio S. Major principal stress (MPS) derived through DXA-based 3D modelling as a high predictive new variable for hip fracture Osteoporosis International 2018; 29(527).
Gooya A, Lekadir K, Castro-Mateos I, Pozo J, Frangi A. Mixture of Probabilistic Principal Component Analyzers for Shapes from Point Sets. IEEE Transactions on Pattern Analysis and Machine Intelligence 2018; 40(4): 891-904. Publication link
Rodriguez Martin R, del Rio Barquero L, Cetin I, Ruiz Wills C, González Ballester MA, Noailly J, Lekadir K.. Modelado predictivo de la fractura de fémur a partir de imágenes DXA usando radiomica y técnicas de aprendizaje supervisadas.. Revista de Osteoporosis y Metabolismo Mineral 2018; 10( ).
Kjer HM, Fagertun J, Wimmer W, Gerber N, Vera S., Barazzetti L, Mangado N, Ceresa M, Piella G, Stark T, Stauber M, Reyes M, Weber S, Caversaccio M, González Ballester MA, Paulsen RR.. Patient-specific estimation of detailed cochlear shape from clinical CT images. International Journal of Computer Assisted Radiology and Surgery 2018; 13(3): 389-396. Publication link
Ruiz Wills C, Tassani S, González Ballester MA, Humbert L, del Río L, Noailly J.. Predicting the risk of hip fracture from DXA-based 3D finite element simulations.. Calcified Tissue International 2018; 102(Suppl. 1).
Ruiz Pujadas E, Kjer HM, Piella G, González Ballester MA.. Random walks with statistical shape prior for cochlea and inner ear segmentation in micro-CT images. Machine Vision and Applications 2018; 29(3): 405-414. Publication link
Bernardino G, Sanz M, Domenech B, Prat S, Sepúlveda Martínez A, Rodríguez López M, Crispi F, Burgos F, Blanco I, González Ballester MA., Butakoff C, De Craene M, Sitges M, Bijnens B.. Right ventricular morphology remodeling in athletes: a MRI shape analysis study. European Heart Journal 2018; 39(Suppl. 1). Publication link
García-Isla G, Olivares AL, Silva E, Nuñez-Garcia M, Butakoff C, Sanchez-Quintana D, G Morales H, Freixa X, Noailly J, De Potter T, Camara O.. Sensitivity analysis of geometrical parameters to study haemodynamics and thrombus formation in the left atrial appendage. International Journal for Numerical Methods in Biomedical Engineering 2018; 34(8): 1-14. Publication link
Suinesiaputra A, Ablin P, Alba X, Alessandrini M, Allen J, Bai W, Cimen S, Claes P, Cowan B, Dhooge J, Duchateau N, Ehrhardt J, Frangi A, Gooya A, Grau V, Lekadir K. Statistical Shape Modeling of the Left Ventricle: Myocardial Infarct Classification Challenge. IEEE journal of biomedical and health informatics 2018; 22(2): 503-515. Publication link
Mangado N, Ceresa M, López Velazco R, Mistrik P, González Ballester MA.. Surgical planner for cochlear implantation outcome prediction. International Journal of Computer Assisted Radiology and Surgery 2018; 13( ).
Funke J, Zhang C, Pietzsch T, González Ballester MA, Saalfeld S. The candidate multi-cut for cell segmentation. Proceedings of the IEEE International Symposium on Biomedical Imaging 2018; ( ): 649-653. e-Repositori
Wills CR, Foata B, González Ballester M, Karppinen J, Noailly J.. Theoretical explorations generate new hypotheses about the role of the cartilage endplate in early intervertebral disk degeneration. Frontiers in Physiology 2018; 9( ): 1-12. Publication link
Mangado López, Nerea; Ceresa, Mario; Benav, Heval; Mistrik, Pavel; Piella Fenoy, Gemma; González Ballester, Miguel Ángel. Towards a complete in-silico assessment of the outcome of cochlear implantation surgery. Molecular Neurobiology 2018; 55(1): 173-186. Publication link e-Repositori
Tassani S, Pani M, Noailly J, González Ballester MA.. Trabecular Fracture Zone Might Not Be the Higher Strain Region of the Trabecular Framework. Frontiers in materials 2018; 5(6): 1-9. Publication link e-Repositori
Ruiz G, Ramón E, García J, Sukno, FM, González Ballester MA.. Weighted regularized statistical shape space projection for breast 3D model reconstruction. Medical Image Analysis 2018; 47( ): 164-179. Publication link
Cárdenes R, Zhang C, Klementieva O, Werner S, Guttmann P, Pratsch C, Cladera J, Bijnens BH. 3D membrane segmentation and quantification of intact thick cells using cryo soft X-ray transmission microscopy: A pilot study. PLoS ONE 2017; 12(4). Publication link e-Repositori
Bernardino G., Butakoff C., Nunez-Garcia M., Imre Sarvari S., Rodriguez-Lopez M., Crispi F., González Ballester M.A., De Craene M., Bijnens B. 3D shape assessment from 2D echocardiography using machine learning. European Heart Journal 2017; 38(S1). Publication link
Olivares AL, Silva E, Nunez-Garcia M, Butakoff C, Sanchez-Quintana D, Freixa X, Noailly J, De Potter T, Camara O. 86 Combined analysis of virtual haemodynamics patterns and LAA morphologies in relation with the risk of thrombus formation. European Heart Journal 2017; 38(1).
Gerber N, Reyes M, Barazzetti L, Kjer HM, Vera S, Stauber M, Mistrik P, Ceresa M, Mangado N, Wimmer W, Stark T, Paulsen RR, Weber S, Caversaccio M, González Ballester MA. A Multiscale imaging and modelling dataset of the human inner ear. Scientific Data 2017; 4(170132). Publication link e-Repositori
Garcia-Canadilla, Patricia; Rodriguez, Jose F.; Palazzi, Maria J.; Gonzalez-Tendero, Anna; Schönleitner, Patrick; Balicevic, Vedrana; Loncaric, Sven; Luiken, Joost J. F. P.; Ceresa, Mario; Camara, Oscar; Antoons, Gudrun; Crispi Brillas, Fàtima; Gratacós Solsona, Eduard; Bijnens, Bart. A two dimensional electromechanical model of a cardiomyocyte to assess Intra-cellular regional mechanical heterogeneities. PLoS ONE 2017; 12(8). Publication link e-Repositori
Korfiatis VC, Tassani S, Matsopoulos GK. An Independent Active Contours Segmentation framework for bone micro-CT images. Computers in Biology and Medicine 2017; 87( ): 358-370. Publication link
Gil, Debora; Vera, Sergio; Borràs, Agnés; Andaluz, Albert; González Ballester, Miguel Ángel. Anatomical medial surfaces with efficient resolution of branches singularities. Medical Image Analysis 2017; 35( ): 390-402. Publication link
Hahner N., Benkarim O., Piella G., Sanroma G., Zimmer V., Puerto B., Gratacos E., Bargallo N., González Ballester M.A., Eixarch E. Automatic evaluation of cortical folding pattern in isolated ventriculomegaly by magnetic resonance imaging. Ultrasound in Obstetrics and Gynecology 2017; 50(S1): 157-158. Publication link
Wang, Xingce; Liu, Yue; Wu, Zhongke; Mou, Xiao; Zhou, Mingquan; González Ballester, Miguel Ángel; Zhang, Chong. Automatic Labeling of Vascular Structures with Topological Constraints via HMM. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10434( ): 208-215. Publication link e-Repositori
López Picazo M., Humbert L., Winzenrieth R., del Río L., di Gregorio S., González Ballester M.A. Changes in volumetric BMD and cortical thickness measured by 3D-DXA in the lumbar spine after 24 months of Denosumab treatment. Journal of Bone and Mineral Research 2017; 32(S1): 293-294. Publication link
Sánchez Martínez, Sergio; Duchateau, Nicolas Guillem; Erdei, Tamas; Fraser, Alan G.; Bijnens, Bart; Piella Fenoy, Gemma. Characterization of Myocardial Motion Patterns by Unsupervised Multiple Kernel learning. Medical Image Analysis 2017; 35(1): 70-82. Publication link e-Repositori
Valero A., Butakoff C., Camara O., Núñez-García M., Tassani S., Piella G., González Ballester M.A., Gispert J.D., Falcón C., Molinuevo J.L., Sanroma G. Characterizing hippocampal morphology as a function of ApoE4 allele load in healthy middle-aged individuals. Magnetic Resonance Materials in Physics, Biology and Medicine 2017; 30(S1): 193-194. Publication link
Nogueira M., Piella G., Sanchez-Martinez S., Langet H., Saloux E., Bijnens B., and De Craene M. Characterizing patterns of response during mild stress-testing in continuous echocardiography recordings using a multiview dimensionality reduction technique. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10263( ): 502-513. Publication link e-Repositori
López-Linares K., Kabongo L., Lete N., Maclair G., Ceresa M., García-Familiar A., Macía I., González Ballester M.A. DCNN-based automatic segmentation and quantification of aortic thrombus volume: influence of the training approach. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10552( ): 29-38. Publication link
Benkarim O.M., Piella G., González Ballester M.A., Sanroma G. Discriminative confidence estimation for probabilistic multi-atlas label fusion. Medical Image Analysis 2017; 42( ): 274-287. Publication link
Bernardino GButakoff C, Nuñez-Garcia M, Imre Sarvari S, Rodriguez-Lopez M, Crispi F, González Ballester MÁ, Mathieu De Craene, Bijnens B.. Estimating 3D ventricular shape from 2D echocardiography: Feasibility and effect of noise. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10263( ): 450-460. Publication link e-Repositori
del Río L.M., Ruiz Wills C., Olivares A., di Gregorio S., Tassani S., Martínez-Pardo S., Gregorov M., Noailly J., González Ballester M.A. Finite element analysis 3D-DXA femur reconstructions to predict hip fracture. Journal of Bone and Mineral Research 2017; 32(S1): 90-91.
López-Linares K, Aranjuelo N, Kabongo L, Maclair G, Lete N, Leskovsky P, García-Familiar A, Macía I, González Ballester MA. Fully automatic segmentation of abdominal aortic thrombus in post-operative CTA images using deep convolutional neural networks. International Journal of Computer Assisted Radiology and Surgery 2017; 12(s1). Publication link
Olivares AL, Silva E, Nuñez-Garcia M, Butakoff C, Sánchez-Quintana D, Freixa X, Noailly J, De Potter T, Camara O. In silico analysis of haemodynamics in patient-specific left atria with different appendage morphologies. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10263( ): 412-420. Publication link
Alises A, Ceresa M, González Ballester MA. In-silico modeling and activation of the bilateral subthalamic nucleus for DBS surgery planning. International Journal of Computer Assisted Radiology and Surgery 2017; 12(S1). Publication link
Mangado N., Ceresa M., Mistrik P., González Ballester M.A. Insertion depth influence on the performance of in-silico cochlear implantation models. International Journal of Computer Assisted Radiology and Surgery 2017; 12(1): 99-100.
Mangado N., Ceresa M., Mistrik P., González Ballester M.A. Insertion depth influence on the performance of in-silico cochlear implantation models. International Journal of Computer Assisted Radiology and Surgery 2017; 12(S1).
Zimmer, Veronika Anne; Glocker, Ben; Hahner, Nadine; Eixarch, Elisenda; Sanromà, Gerard; Gratacós Solsona, Eduard; Rueckert, Daniel; González Ballester, Miguel Ángel; Piella Fenoy, Gemma. Learning and combining image neighborhoods using random forests for neonatal brain disease classification. Medical Image Analysis 2017; 42( ): 189-199. Publication link e-Repositori
Cortés M., Butakoff C., Camara O., Nuñez M., Tassani S., Piella G., González Ballester M.A., Tudela R., Soria G., Muñoz-Moreno E., Sanroma G. Longitudinal shape analysis of hippocampus in an experimental model of Alzheimer's disease. Magnetic Resonance Materials in Physics, Biology and Medicine 2017; 30(S1): 30-31. Publication link
Sanchez-Martinez S., Duchateau N., Erdei T., Kunszt G., A. Degiovanni A., Carluccio E., Fraser A.G., Piella G., Bijnens B.H. Machine-learning based exploration of variability of longitudinal myocardial velocities in heart failure with preserved ejection fraction. European Journal of Heart Failure 2017; 19(S1): 502-503.
Cikes M, Sanchez-Martinez S, Biering-Sorensen T, Pouleur AC, Knappe D, Kutyifa V, Moss A, Stein K, Bijnens B, Solomon SD. Machine-learning characterization of myocardial deformation patterns to identify responders to resynchronization therapy. European Heart Journal 2017; 38(1).
Guardiola M, Ceresa M, Romeu J, Fernández-Esparrach G, González Ballester MA, Camara O. Microwave endoscopy for colorectal cancer prevention. International Journal of Computer Assisted Radiology and Surgery 2017; 12(s1). Publication link
Mountris K, Bert J, Noailly J, Rodriguez Aguilera A, Valeri A, Pradier O, Schick U, Promayon E, González Ballester MA, Troccaz J, Visvikis D. Modeling the impact of prostate edema on LDR brachytherapy: a Monte Carlo dosimetry study based on a 3D biphasic finite element biomechanical model. Physics in medicine & biology 2017; 62(6): 2087-2102. Publication link
Puigbò JY, González Ballester MA, Verschure PFMJ. Modeling the neural substrates of learning through conditioning: a two-phased model. IBM Journal of Research and Development 2017; 61(2/3): 1-11. Publication link
Ceresa M, Olivares AL, Fernández S, Noailly J, González MA. Multi-scale immunological and biomechanical model of emphysema progression Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society 2017; 2712(2715).
Benkarim OM, Piella G, González Ballester MA, Sanroma G. On the role of patch spaces in patch-based label fusion. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10530( ): 37-44. Publication link
Toumanidou T, Noailly J, Ceresa M, Zhang C, López-Linares K, Macía I, González Ballester MA. Patient-specific modeling of unruptured human abdominal aortic aneurysms using deformable hexahedral meshes. International Journal of Computer Assisted Radiology and Surgery 2017; 12(s1). Publication link
Soto-Iglesias D, Penela D, Planes X, Zimmer V, Acosta J, Andreu D, Piella G, Sebastian R, Sancher-Quintana D, Berruezo A, Camara O. Quasi-conformal technique for integrating and validating myocardial tissue characterization in MRI with ex-vivo human histological data. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10124( ): 172-181. Publication link
Puigbò JY, Gonzalez-Ballester MA, Verschure PFMJ. State dependent modulation of perception based on a computational model of conditioning. Lecture Notes in Computer Science / Artificial Intelligence 2017; 10613( ).
Ceresa M, Torrents-Barrena J, Alises A, Masoller N, Eixarch E, Gratacós E, González Ballester MA. Surgical planning system for twin-to-twin transfusion syndrome fetal surgery. International Journal of Computer Assisted Radiology and Surgery 2017; 12(s1). Publication link
Raote, Ishier Ortega Bellido, María Pirozzi, Marianella Zhang, Chong Melville, David Parashuraman, Seetharaman Zimmermann, Timo Malhotra, Vivek. TANGO1 assembles into rings around COPII coats at ER exit sites. The Journal of Cell Biology 2017; 16(4): 901-909. Publication link e-Repositori
Benkarim OM, Sanroma G, Zimmer VA, Muñoz-Moreno E, Hahner N, Eixarch E, Camara O, González Ballester MA, Piella G. Toward the automatic quantification of in utero brain development in 3D structural MRI: A review. Human Brain Mapping 2017; 38(5): 2772-2787. Publication link
Baruffaldi, Fabio; Stoico, Rossella; Tassani, Simone; Mecozzi, Laura; Falcioni, Stefano; Fersini, Chiara. VALIDATION OF A BONE MINERAL DENSITY CALIBRATION PROTOCOL FOR MICRO-COMPUTED TOMOGRAPHY. Journal of Mechanics in Medicine and Biology 2017; 17(1). Publication link
Zimmer VA, Hahner N, Eixarch E, Gratacós E, González Ballester MA, Piella G. Volume-to-slice registration of fetal 3D magnetic resonance and 2D ultrasound data. International Journal of Computer Assisted Radiology and Surgery 2017; 12(s1). Publication link
Zimmer V.A., Hahner N., Eixarch E., Gratacós E., González Ballester M.A., Piella G. Volume-to-slice registration of fetal 3D magnetic resonance and 2D ultrasound data. International Journal of Computer Assisted Radiology and Surgery 2017; ( ): 18-19.
Gonzalez-Tendero, Anna; Zhang, Chong; Balicevic, Vedrana; Cárdenes, Rubén; Loncaric, Sven; Butakoff, Constantine; Paun, Bruno; Bonnin, Anne; Garcia-Cañadilla, Patricia; Muñoz-Moreno, Emma; Gratacós, Eduard; Crispi, Fatima; Bijnens, Bart. Whole heart detailed and quantitative anatomy,myofibre structure and vasculature from X-ray phase-contrast synchrotron radiation-basedmicro computed tomography. European Heart Journal Cardiovascular Imaging 2017; 18(7): 732-741. Publication link e-Repositori
López Picazo, Mirella; Humbert, Ludovic; Magallón, Alba; del Rio, Luis; Di Gregorio, Silvana; González Ballester, Miguel Ángel. 3D-DXA Spine: Modelling the lumbar spine in 3D from DXA images. Journal of Bone and Mineral Research 2016; 31(S1).
Reagh, Justin J.; González Ballester, Miguel Ángel; Noailly, Jérôme. Agent-based modelling of nucleus pulposus cells response to nutrition, inflammation and mechanics. Journal of Biomechanics 2016; ( ).
Mangado N, Piella G, Noailly J, Pons-Prats J, Gonzalez Ballester MA. Analysis of Uncertainty and Variability in Finite Element Computational Models for Biomedical Engineering: Characterization and Propagation. Frontiers in bioengineering and biotechnology 2016; 4( ). Publication link e-Repositori
Mangado, Nerea; Ceresa, Mario; Duchateau, Nicolas; Kjer, Hans Martin; Vera, Sergio; Velardo, Dejea Hector; Mistrik, Pavel; Paulsen, Rasmus R; Fagertun, Jens; Noailly, Jérôme; Piella, Gemma; González Ballester, Miguel Ángel. Automatic Model Generation Framework for Computational Simulation of Cochlear Implantation. Annals of Biomedical Engineering 2016; 44(8): 2453-2463. Publication link
Sanroma G, Benkarim OM, Piella G, Gonzalez Ballester M. Building an ensemble of complementary segmentation methods by exploiting probabilistic estimates Lecture Notes in Computer Science / Artificial Intelligence 2016; 10019( ): 27-35. Publication link
Ruiz Pujadas, Esmeralda; Kjer, Hans Martin; Vera, Sergio; Ceresa, Mario; González Ballester, Miguel Ángel. Cochlea segmentation using iterated random walks with shape prior. Proceedings of SPIE 2016; 9784( ). Publication link
Sanroma G, Benkarim OM, Piella G, Wu G, Zhu X, Shen D, González Ballester MA. Discriminative dimensionality reduction for patch-based label fusion. Lecture Notes in Computer Science / Artificial Intelligence 2016; 9487( ): 94-103. Publication link
Vliegenthart R, Walgrave S, Baumgartner FR, Bevan S, Breunig C, Brouard S, Chaqués L, Grossman E, Jennings W, Mortensen PB, Palau AM, Sciarini P, Tresch A. Do the media set the parliamentary agenda? A comparative study in seven countries.. European Journal of Political Research 2016; 55(2): 283-301. Publication link e-Repositori
Tassani, Simone; Font-Llagunes, Josep Maria; González Ballester, Miguel Ángel; Noailly, Jérôme. Effects of relaxation over postural stability. Journal of Biomechanics 2016; ( ).
Benkarim OM, Piella G, Gonzalez Ballester MA, Sanroma G. Enhanced probabilistic label fusion by estimating label confidences through discriminative learning Lecture Notes in Computer Science / Artificial Intelligence 2016; 9901( ): 505-512. Publication link
Karim R, Bhagirath P, Claus P, Housden RJ, Chen Z, Karimaghaloo Z, Sohn HM, Lara Rodríguez L, Vera S, Albà X, Hennemuth A, Peitgeng HO, Arbeld T, Gonzàlez Ballester MA, Frangi AF, Götte M, Razavi R, Schaeffter T, Rhode K. Evaluation of state-of-the-art segmentation algorithms for left ventricle infarct from late Gadolinium enhancement MR images. Medical Image Analysis 2016; 30( ): 95-107. Publication link
Carrera, Ión; Gelber, Pablo Eduardo; Chary, Gaetan; González Ballester, Miguel Ángel; Monllau, Juan Carlos; Noailly, Jérôme. Fixation of a split fracture of the lateral tibial plateau with a locking screw plate instead of cannulated screws would allow early weight bearing: a computational exploration. International Orthopaedics 2016; 40(10): 2163-2169. Publication link
Besalduch M, Carrera I, Gelber PE, Noailly J, Chary G, González Ballester MA. Fixation of a split fracture of the lateral tibial plateau with a locking screw plate instead of cannulated screws would allow early weight bearing: a computational examination. Knee Surgery, Sports Traumatology, Arthroscopy 2016; ( ).
Kjer, Hans Martin; Fagertun, Jens; Vera, Sergio; Gil, Debora; González Ballester, Miguel Ángel; Paulsen, Rasmus R. Free-form image registration of human cochlear µCT data using skeleton similarity as anatomical prior. Pattern Recognition Letters 2016; 76(1): 76-82. Publication link
Porras, A.R.; Alessandrini, M.; Mirea, O.; D'hooge, J.; Frangi, A.F.; Piella, G.. Integration of multi-plane tissue Doppler and B-mode echocardiographic images for left ventricular motion estimation. IEEE Transactions on Medical Imaging 2016; 35(1): 89-97. Publication link
Pujadas ER, Kjer HM, Piella G, González Ballester MA. Iterated random walks with shape prior. Image and Vision Computing 2016; 54(1): 12-21. Publication link
Beraud, Alina i; Tassani, Simone Bianconi, Eva; Strippoli, Pierluigi; Canaider, Silvia. Letter to the Editor: On osteocytes density in the human body. Bone 2016; 93( ). Publication link
Sanchez-Martinez S, Duchateau N, Erdei T, Kunszt G, Degiovanni A, Carluccio E, Fraser AG, Piella G, Bijnens B. Machine-learning based diagnosis of heart failure with preserved ejection fraction: how much do we agree with the guidelines?. European Heart Journal 2016; 17(S2).
Magallón Baro A, López Picazo M, del Rio L, Di Gregorio S, González Ballester MA, Humbert L. Medidas sobre la geometría y la densidad mineral ósea de la columna lumbar obtenidas mediante la tecnología 3D-DXA. Revista de Osteoporosis y Metabolismo Mineral 2016; 8(3).
Mangado, Nerea; Ceresa, Mario; Dejea Velardo, Héctor; Kjer, Hans Martin; Vera, Sergio; Mistrik, Pavel; González Ballester, Miguel Ángel. Monopolar stimulation of the implanted cochlea: a synthetic population-based study. Lecture Notes in Computer Science / Artificial Intelligence 2016; 9401( ): 96-103. Publication link
Sanroma G, Penate-Sanchez A, Alquézar R, Serratosa F, Moreno-Noguer And j. Andrade-Cetto F. MSClique: Multiple Structure Discovery through the Maximum Weighted Clique Problem. PLoS ONE 2016; 11(1): 0145846-0145846. Publication link
Romera Romero, Jordi; Kjer, Hans Martin; Piella, Gemma; Ceresa, Mario; González Ballester, Miguel Ángel. Multi-region statistical shape model for cochlear implantation. Proceedings of SPIE 2016; 9784( ). Publication link
Ruiz Wills C, Olivares A, Tassani S, Humbert L, González Ballester MA, del Río Barquero LM, Noailly J. Patient-specific finite element analysis of the proximal femur for the quantification of hip fracture risk in osteoporotic patients. Osteoporosis International 2016; ( ). Publication link
Ruiz, E.; Kjer, H.M.; Piella, G.; Ceresa, M.; Gonzalez-Ballester, M.A.. Random Walks with Shape Prior for Cochlea Segmentation in Ex-vivo MicroCT . International Journal of Computer Assisted Radiology and Surgery 2016; 11(9): 1647-1659. Publication link
Ruiz Wills C, Olivares A, Tassani S, Humbert L, González Ballester MA, del Río Barquero LM, Noailly J. Resistencia ósea de fémur en pacientes con osteoporosis valorada mediante 3D-DXA aplicando análisis de elementos finitos: estudio casos-control. Revista de Osteoporosis y Metabolismo Mineral 2016; 8(3).
Ruiz Wills C, Malandrino A, van Rijsbergen MM, Lacroix D, Ito K, Noailly J. Simulating the sensitivity of cell nutritive environment to composition changes within the intervertebral disc. Journal of the Mechanics and Physics of Solids 2016; 90( ): 108-123. Publication link
Lekadir, M.; Lange, M.; Zimmer, V.A.; Hoogendoorn; Frangi, A.F.. Statistically-driven 3D fiber reconstruction and denoising from multi-slice cardiac DTI using a Markov random field model. Medical Image Analysis 2016; 27(1): 105-116. Publication link
Olivares, Andy L; González Ballester, Miguel Ángel; Noailly, Jérôme. Virtual exploration of early stage atherosclerosis. Bioinformatics 2016; 32(24): 3798-3806. Publication link
Zimmer V, Lekadir K, Hoogendoorn C, Frangi A, Piella G. A framework for optimal kernel-based manifold embedding of medical image data. Computerized Medical Imaging and Graphics 2015; 41( ): 93-107. Publication link
Vera, Sergio; González Ballester, Miguel Ángel; Gil, Debora. A novel cochlear reference frame based on the Laplace equation. International Journal of Computer Assisted Radiology and Surgery 2015; 10(S1): 187-188.
Sanroma G, Wu G, Gao Y, Thung KH, Guo Y, Shen D. A Transversal Approach for Patch-based Label Fusion via Matrix Completion. Medical Image Analysis 2015; 24(1): 135-148. Publication link
Mangado, Nerea; Ceresa, Mario; Duchateau, Nicolas; Dejea Velardo, Héctor; Kjer, Hans Martin; Paulsen, Rasmus; Vera, Sergio; Mistrik, Pavel; Herrero Jover, Javier; González Ballester, Miguel Ángel. Automatic generation of a computational model for monopolar stimulation of cochlear implants. International Journal of Computer Assisted Radiology and Surgery 2015; 10(S1): 67-68. Publication link
Cerrolaza, Juan J; Reyes, Mauricio; Summers, Ronald M; González Ballester, Miguel Ángel; Linguraru, Marius George. Automatic multi-resolution shape modeling of multi-organ structures. Medical Image Analysis 2015; 25(1): 11-21. Publication link
Du S, Guo Y, Sanroma G, Ni D, Wu G, Shen D. Building Dynamic Population Graph for Accurate Correspondence Detection. Medical Image Analysis 2015; 26(1): 256-267. Publication link
Sanchez-Martinez S., Duchateau N., Erdei T., Fraser AG., Bijnens B., Piella G. Can machine learning help to identify heart failure with preserved ejection fraction?. European Heart Journal 2015; 16(S2): 38-39. Publication link
Sanchez-Martinez S, Duchateau N, Bijnens B, Erdei T, Fraser AG, Piella G. Characterization of myocardial velocities by multiple kernel learning: application to heart failure with preserved ejection fraction. Lecture Notes in Computer Science / Artificial Intelligence 2015; 9126( ): 65-73. Publication link
Vera, Sergio; Caro, Rocio; Pérez, Frederic; Bordone, Maurizio; Herrero Jover, Javier; Kjer, Hans Martin; Fagertun, Jens; Paulsen, Rasmus; Dhanasingh, Anandhan; Barazzetti, Livia; Reyes, Mauricio; Ceresa, Mario; González Ballester, Miguel Ángel. Cochlear implant planning, selection and simulation with patient specific data. International Journal of Computer Assisted Radiology and Surgery 2015; 10(S1): 43-44. Publication link
Ceresa, Mario; Mangado, Nerea; Andrews, Russell J.; González Ballester, Miguel Ángel. Computational models for predicting outcomes of neuroprosthesis implantation: the case of cochlear implants. Molecular Neurobiology 2015; 52(2): 934-941. Publication link
Bagué, Alexis; del Río, Luis; di Gregorio, Silvana; Martelli, Yves; González Ballester, Miguel Ángel; Humbert, Ludovic. Cortical and trabecular bone analysis of hip fracture patients using 3D-DXA. Journal of Bone and Mineral Research 2015; 30(S1).
Humbert, Ludovic; Bagué, Alexis; di Gregorio, Silvana; Martelli, Yves; González Ballester, Miguel Ángel; del Río Barquero, Luis Miguel. Cortical and trabecular bone analysis of patients with hip fracture and controls using 3D-DXA. Osteoporosis International 2015; 26(S1): 250-251.
Garcia S, Sunyer R, Olivares A, Noailly JB, Atencia J, Trepat X. Generation of stable orthogonal gradients of chemical concentration and substrate stiffness in a microfluidic device. Lab on a Chip - Miniaturisation for Chemistry and Biology 2015; 15( ): 2606-2614. Publication link
Wu G, Kim MJ, Sanroma G, Wang Q, Shen D. Hierarchical Multi-Atlas Label Fusion with Multi-Scale Feature Representation and Label-specific Patch Partition. NeuroImage 2015; 106( ): 34-46. Publication link
Kjer, Hans Martin; Vera, Sergio; Fagertun, Jens; Gil, Debora; González Ballester, Miguel Ángel; Paulsen, Rasmus. Image Registration of Cochlear µCT Data Using Heat Distribution Similarity. Lecture Notes in Computer Science / Artificial Intelligence 2015; 9127( ): 234-245. Publication link
Erdei T., Sunderji I., Sanchez-Martinez S., Edwards J., Braim D., Price C., Bijnens B., Fraser AG. In heart failure with preserved ejection fraction carotid arterial stiffness is increased and may contribute to reduced functional reserve. European Heart Journal 2015; 16(S2).
Zimmer, Veronika A; Glocker, Ben; Aljabar, Paul; Counsell, Serena J; Rutherford, Mary A; Edwards, A David; Hajnal, Jo V; González Ballester, Miguel Ángel; Rueckert, Daniel; Piella, Gemma. Learning and Combining Image Similarities for Neonatal Brain Population Studies. Lecture Notes in Computer Science / Artificial Intelligence 2015; 9352( ): 110-117. Publication link
Toumanidou T, Noailly JB. Musculoskeletal Modeling of the Lumbar Spine to Explore Functional Interactions between Back Muscle Loads and Intervertebral Disk Multiphysics. Frontiers in bioengineering and biotechnology 2015; 3(111): 1-13. Publication link
Malandrino A, M. Pozo J, Castro-Mateos I, F. Frangi A, M. Van Rijsbergen M, Ito K, Wilke HJ, Tuan Dao T, Ho Ba Tho MC, Noailly JB. On the Relative Relevance of Subject-Specific Geometries and Degeneration-Specific Mechanical Properties for the Study of Cell Death in Human Intervertebral Disk Models. Frontiers in bioengineering and biotechnology 2015; 3(5): 1-15. Publication link
Mangado, Nerea; Duchateau, Nicolas; Ceresa, Mario; Kjer, Hans Martin; Vera, Sergio; Mistrik, Pavel; Herrero Jover, Javier; González Ballester, Miguel Ángel. Patient-specific virtual insertion of electrode array for electrical simulation of cochlear implants. International Journal of Computer Assisted Radiology and Surgery 2015; 10(S1): 102-104. Publication link
Malandrino A, Jackson AR, Huyghe JM, Noailly JB. Poroelastic modeling of the intervertebral disc: A path toward integrated studies of tissue biophysics and organ degeneration. MRS bulletin 2015; 40( ): 324-332. Publication link
Kjer, Hans Martin; Vera, Sergio; Fagertun, Jens; Pérez, Frederic; Herrero Jover, Javier; González Ballester, Miguel Ángel; Paulsen, Rasmus R. Predicting detailed inner ear anatomy from pre-operational CT for cochlear implant surgery. International Journal of Computer Assisted Radiology and Surgery 2015; 10(S1): 98-99.
Sánchez-Martinez, S.; Duchateau, N.; Erdei, T.; Fraser, A.; Piella, G.; Bijnens, B.H.. Quantifying the contribution of stress echocardiography to the diagnosis of heart failure with preserved ejection fraction. European Heart Journal Cardiovascular Imaging 2015; 16(S2).
Sanchez-Martinez S., Duchateau N., Erdei T., Fraser AG., Piella G., Bijnens B. Quantifying the contribution of stress echocardiography to the diagnosis of heart failure with preserved ejection fraction. European Heart Journal 2015; 16(S2). Publication link
Duchateau N., Mangado N., Ceresa M., Mistrik P., Vera S., González Ballester M.A. Virtual cochlear electrode insertion via parallel transport frame. Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI) 2015; ( ).
Zimmer VA, Piella G. An adaptive multiscale similarity measure for non-rigid registration. Lecture Notes in Computer Science / Artificial Intelligence 2014; 8545( ): 203-212. Publication link
Vera, Sergio; González Ballester, Miguel Ángel; Gil, Debora. Anatomical parameterization for volumetric meshing of the liver. Progress in Biomedical Optics and Imaging 2014; 9036( ). Publication link

Higueras-Esteban A, Delgado-Martínez I, Serrano L, Principe A, González Ballester MA, Rocamora R, Conesa G, Serra L. A multimodal and multidisciplinary platform for epilepsy surgery. Computer Methods and Programs in Biomedicine 2021; 203( ).

Torrents-Barrena J, Monill N, Piella G, Gratacós E, Eixarch E, Ceresa M, González Ballester MA. Assessment of Radiomics and Deep Learning for the Segmentation of Fetal and Maternal Anatomy in Magnetic Resonance Imaging and Ultrasound. Academic Radiology 2021; 28(2): 173-188.