We have relevant datasets, repositories, frameworks and tools of relevance for research and technology transfer initiatives related to knowledge extraction. This section provides an overview on a selection of them and links to download or contact details.

The MdM Strategic Research Program has its own community in Zenodo for material available in this repository  as well as at the UPF e-repository  . Below a non-exhaustive list of datasets representative of the research in the Department.

As part of the promotion of the availability of resources, the creation of specific communities in Zenodo has also been promoted, at level of research communities (for instance, MIR and Educational Data Analytics) or MSc programs (for instance, the Master in Sound and Music Computing)

 

 

Back [BIOIMAGE] 2D bright field Fission yeast cell images with ground truth annotations

2D bright field Fission yeast cell images with ground truth annotations. Chong Zhang.

Original images are from http://www-bcf.usc.edu/~forsburg/pombeX.html. This software is associated with the publication "PombeX: robust cell segmentation for fission yeast transillumination images", PLoS One 2013. (doi: 10.1371/journal.pone.0081434)

Here, we provide the ground truth labels of: cell centers and segmentation, which are used in the publications:

  • "Learning to Segment: Training Hierarchical Segmentation under a Topological Loss", MICCAI 2015. (DOI: 10.1007/978-3-319-24574-4_32)
  • "Hierarchical Planar Correlation Clustering for Cell Segmentation", EMMCVPR 2015. (DOI: 10.1007/978-3-319-14612-6_36)
  • "Cell Detection and Segmentation Using Correlation Clustering", MICCAI 2014. (DOI: 10.1007/978-3-319-10404-1_2)